Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015885730.1_cds_XP_016439790.1_35310
CDS Infomation

[gene=LOC107765639] [db_xref=GeneID:107765639] [protein=protein KAKU4-like] [protein_id=XP_016439790.1] [location=join(30966..31221,33949..34004,36566..36642,45291..45409,45534..45661,50563..50736,53153..53369,53448..53527,53664..53751,53891..53984,54057..54372)] [gbkey=CDS]
Sequence

ATGGATTCCCGTTCCGGAGGAAAAATTGTGACGAATAGGCGAAAGAGATACGCCGTCGGT
CCATACGACCGTCCACCACCACCACCGCCGCCGCCGGAAGTACAGCAACCGTTTCCTAAA
AGCCCTAATTGGCTTACCGGCCGTGTTGTTCCGGCGACGCGTACGATTCTCTCCGGCGCC
GCGAAGATTTTAACATCTGTATTCAATTCCGACTCTTCTTCTTCCTCGTCTTCCTCCGAC
GCTGATTCCATGTTTGCGGATGATGCTAGAGAACATAATGATATTGGCTTGGAAGTGGAT
GAGTTAAGCAAGGATCCTCAATTAAGTGGAGAGAGAAGTACAACGAAGCACCTAATTGAG
CAGCTACTTATGCAGGAGACATTTTCAAGGAAGGAGCGTGATAGGTTAGTAACAATCATC
AACTCCAGGGTTGTTGATTTTTCATCACTAGAAGGAGAAGGCAGCTTTGGTTTGCGCTCC
GCAATACCTGATCAAGCAATTGCAGATGATACGCTGGATCTCAGCAGTCGTGCAATTGTA
GAAGCAAGGAAATGGTTAGAGGAAAAGAGAGAGGAAAAGAGAGACGGATTGGGTTTAGAT
ATTACTCACGGAGGTTTAAGCTCTGGAGTTAAAAACGTGGATGATACTTTTGGCTCACCG
GTAGATATGGCTAGGTCATATATGAAGGTTCGTCCTCCATGGGCCTCTCCTACTGTTGAT
CAGAGTGGACTTGGAACCCCCTCACATCTGAAGGCAAAGCTCTTTGAGGAAGGAACACCG
TATACTGGGGATTCTTCTTCTTCCTTAAAGAAAAAGAATTCTTTTGCATCTGGCTCATGG
AATATTCATGATGAAATACGAAAAGTACGGTCAAAAGCAACTGAGGATCTGTTACGTGCT
CGCCCTTTCAAGGCAGAACCAAAATCTGCAGTTGGTAATTTGACAGGAACTAGTACCGGA
GAGAAGATAAATAGCTCAAGTTCTTTGAGACTTACTAAACTGTCAGATGTACCAATTAAG
TGGTCAGATGTGGAAATAACACAAGATGATGGAGAAAATATCACTCAGCCTCTAAATCCT
GCCTCTTCCGTTCAGCTCCATGATCAGGGTATTGAGGTAAGTAGGGTTGGCGAGCATGCT
GCTTGTGAATCGCACAGGCCCAATGGTCCAGCTTTCCCCTCAGAGCACAGTGATGGTCTT
CGTATAACTGGCGCTGATGCACATGAGGTGACTCAAACAAATGCAGCACAAAGTTCTAAT
GGATATGCATCTATAGAAATAGAAGCTAGTTTGTCTGCAGGTCTAACATCAGGACAAAAC
AATGTGCATGTCGGCGGTGAGAAGCCTAAACCAGGAATGTCGATTCAGCAGAAATTGACT
GAATCTACCCAAGTCGAGGATAAGTGTGAGCTTCTTAGCGAATCTGCTGTGGATGTACCA
GAAATGAACGAAACAACCGACAGTCCAGCTGCTTCGATGCCTAGTGAAGAATTATCACAG
GAGGAACCGGGTTTGGTACGTGAGTTGGCAAAGAATGGCAAAGTTGTGAAGCAACAAGGA
AAGAGACCAGTCAGAAATGTGAGAAAGACGAGAGCAAAGAGGTAA

Peptide Sequence

PEP ID

XP_016439790.1
PEP Infomation

PREDICTED: protein KAKU4-like [Nicotiana tabacum]
Sequence

MDSRSGGKIVTNRRKRYAVGPYDRPPPPPPPPEVQQPFPKSPNWLTGRVVPATRTILSGA
AKILTSVFNSDSSSSSSSSDADSMFADDAREHNDIGLEVDELSKDPQLSGERSTTKHLIE
QLLMQETFSRKERDRLVTIINSRVVDFSSLEGEGSFGLRSAIPDQAIADDTLDLSSRAIV
EARKWLEEKREEKRDGLGLDITHGGLSSGVKNVDDTFGSPVDMARSYMKVRPPWASPTVD
QSGLGTPSHLKAKLFEEGTPYTGDSSSSLKKKNSFASGSWNIHDEIRKVRSKATEDLLRA
RPFKAEPKSAVGNLTGTSTGEKINSSSSLRLTKLSDVPIKWSDVEITQDDGENITQPLNP
ASSVQLHDQGIEVSRVGEHAACESHRPNGPAFPSEHSDGLRITGADAHEVTQTNAAQSSN
GYASIEIEASLSAGLTSGQNNVHVGGEKPKPGMSIQQKLTESTQVEDKCELLSESAVDVP
EMNETTDSPAASMPSEELSQEEPGLVRELAKNGKVVKQQGKRPVRNVRKTRAKR

Transcript Sequence

Gene sequence data has not been registered.